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Xi Chen

@XiChenUoM

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Single cell genomics. Junior PI @SUSTechSZ. BSc @PKU1898, PhD @OfficialUoM, Postdoc @emblebi and Senior Staff Scientist @sangerinstitute. @teichlab alumnus.

United Kingdom
Joined February 2009
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@XiChenUoM
Xi Chen
2 years
Our method ISSAAC-seq is officially out @naturemethods You can read the full text via this link: This ATAC+RNA method is flexible & sensitive. The procedure has two semi-independent modules: an in situ reaction and a single cell isolation modules ... 1/3
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@XiChenUoM
Xi Chen
3 months
RT @rachyan_: Pleased to share my thesis work developing MultiPerturb-seq (high-throughput CRISPR + ATAC + RNA screens) to explore cancer r…
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@XiChenUoM
Xi Chen
3 months
RT @sinabooeshaghi: It's well known that the success of #AlphaFold comes from the Protein Data Bank (@rcsbPDB). But did you know that the…
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@XiChenUoM
Xi Chen
3 months
RT @Xiaojie_Qiu: We are thrilled to share that our first paper from my new lab, Spateo ( for spatiotemporal modelin…
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@XiChenUoM
Xi Chen
3 months
RT @simonduerr: Glad to share the first results from the ongoing user survey on BioIcons. Really appreciate that it's used around the globe…
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@XiChenUoM
Xi Chen
3 months
RT @huzheng1: Thrilled to share our paper published in @Nature, where we uncover a new process of tumor initiation through a polyclonal-to-…
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@XiChenUoM
Xi Chen
4 months
RT @loicaroyer: 🚀 Thrilled to announce #inTRACKtive: a web-based tool for exploring massive cell-tracking datasets, no software installatio…
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@XiChenUoM
Xi Chen
4 months
RT @dagarfield: A great collaboration with the ML team here at Genentech. Happy to see this pre-print out: (@lal_av
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@XiChenUoM
Xi Chen
4 months
RT @TSchwammle: How do cis-regulatory landscapes integrate information from many transcription factors (TFs)? Using CRISPR screens we map…
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@XiChenUoM
Xi Chen
4 months
RT @LGMartelotto: STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging | bioRxiv ⁦@DrJasPlummer⁩ ⁦@hoheyn⁩…
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@XiChenUoM
Xi Chen
5 months
RT @RongFan8: Thrilled to report Patho-DBiT, just published in Cell 😊. It allows us to directly “see” all kinds of RNA species on the same…
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@XiChenUoM
Xi Chen
5 months
RT @lh3lh3: Published in 2009, bwa-aln is one of the oldest short-read aligners. It remains a popular choice for aligning ancient DNA reads…
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@XiChenUoM
Xi Chen
5 months
Okay, now successfully submitted to under CC0, with the name "singlecell_droplet_overloading" 😀
@XiChenUoM
Xi Chen
1 year
I want to draw my own schematic view of droplet single cell for figures, but I don't know how to use Inkscape or Illustrator or the like. What I did? I drafted it first by hand, and then use TikZ to draw! Because why not? It was fun! The tex code here:
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@XiChenUoM
Xi Chen
5 months
RT @MessinaOlivier1: 📢 We are thrilled to announce our new manuscript out on BioRxiv: "Chromatin folding motifs define the basic grammar o…
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@XiChenUoM
Xi Chen
5 months
RT @naturemethods: Genes2Genes is a Bayesian framework developed by @Teichlab for aligning single cell pseudotime trajectories at the per g…
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@XiChenUoM
Xi Chen
5 months
RT @NatureBiotech: The Wild West of spike-in normalization
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@XiChenUoM
Xi Chen
5 months
RT @ChenxinLi2: I have a YouTube playlist for molecular biology for my undergrad interns in the lab. I might as well share it here. https:/…
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@XiChenUoM
Xi Chen
5 months
RT @xielablife: One of the X chromosomes in females is silenced with a microscopically distinct chromatin configuration. Happy to share our…
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@XiChenUoM
Xi Chen
6 months
RT @Noam_Kaplan: The radial positioning of genomic loci, i.e. how far they are from the nuclear lamina has been associated with genome stru…
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