Daniel León-Periñán
@danilexn
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PhD Candidate • Computational Modeling of Spatial Omics @BIMSB_MDC @N_Rajewsky lab • Occasional composer and pianist • Own views • he/him • 🐈⬛🐈
Berlin, Deutschland
Joined April 2014
Our #OpenST paper is now online @CellCellPress! Very cool updates ahead🧵⬇️ @L_Marie_Schott @_Elena_93 #GiuseppeMacino @nu_karaiskos @N_Rajewsky
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RT @MSFTResearch: Microsoft researchers introduce MatterGen, a model that can discover new materials tailored to specific needs—like effici…
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RT @N_Rajewsky: when i joined #twitter in 2013, i wrote in my profile “.. trying to find out if twitter can improve life”. 12 years later i…
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And rg my statement about “Foundation Models”: many studies claim that it is possible to predict neighborhood (whatever that means) from (spatial) single-cells. This is not new, and FMs are overkill. Doing this from ST is problematic. There should be other goals for these data.
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A preprint that is truly essential in our lab
I have read few papers as immediately useful and important as this one on Cacio e Pepe phase behavior. Tl;dr: the starchy pasta water is absolutely critical to avoiding “mozzarella phase”
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RT @LabWaggoner: Molecular and spatial analysis of tertiary lymphoid structures in Sjogren’s syndrome @NatureComms…
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RT @AskaryLab: Have you used spatial genomics to map cell types in your favorite tissue? Are you interested in finding patterns in your res…
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Although it still misses some essential points, it is a good preprint. Highly recommended for anyone who is analyzing ST data.
Impact of Segmentation Errors in Analysis of Spatial Transcriptomics Data. #biorxiv_bioinfo
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RT @biorxiv_bioinfo: Impact of Segmentation Errors in Analysis of Spatial Transcriptomics Data. #biorxiv_bioinfo
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RT @genophoria: The first preprint of 2025! Together with @khorms, @halfacrocodile, & our amazing team, we are excited to share PARADE: an…
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