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Yoseph Barash Profile
Yoseph Barash

@YosephBarash

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@[email protected] Opinions - own. Lab @PennGenetics , @CIS_Penn , @UPennIBI

Philadelphia, PA
Joined July 2015
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@YosephBarash
Yoseph Barash
8 hours
@srikosuri Maybe is a good place? I don't know a specific expert name but let me know if you want me to ask around here....
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@YosephBarash
Yoseph Barash
12 days
@SashaGusevPosts @jkpritch @mstephens999 @tuuliel_lab @hjpimentel @kauralasoo As we also wrote in the blog post - This work started many years ago with the late and great @casey6r0wn who kept giving us feedback/insights. We miss him as a friend and colleague. We dedicated the work to Casey and his contributions to Science 💔.
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@YosephBarash
Yoseph Barash
20 days
📣 New post re our recent findings/methods dev for #sQTL #RNA #Splicing #RNA-Seq. We think this will be highly useful/impactful for (s)QTL detection/quantification. Hope to get (constructive 😉) feedback and much usage from the community! 😀
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@YosephBarash
Yoseph Barash
22 days
RT @andrei_thomas_t: An #RNA #splicing project 3 yrs in the making finally sees the light of day. Microexons, meet macroglia… cancerous mac…
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@YosephBarash
Yoseph Barash
1 month
RT @shramdas: Our mentor Casey Brown, apart from being an extraordinary scientist, was a brilliant teacher who loved everything genetics. I…
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@YosephBarash
Yoseph Barash
2 months
RT @pkoo562: I'm hiring: 1. PhD-level Research associate to generate perturbation data 2. ML postdoc to build multimodal generative AI fo…
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@YosephBarash
Yoseph Barash
2 months
RT @gxr: Where RNA Science Meets AI, May 4–8, 2025, Ascona. Invited speakers: @OliverStegle @fabian_theis @fiddle @EvaMariaNovoa @BTreutlei
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@YosephBarash
Yoseph Barash
2 months
@danielle_gutman @PennGenetics @SomePaddy It was great to have you with us! ☺️ You brought positive energy can do attitude to everything/everyone, helped push key projects forward & became the lab social hub along the way. I'm sure you'll bring all that to next position with great success 😀🙌 You will be missed! 🙏
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@YosephBarash
Yoseph Barash
3 months
@santata12 I know there are dependencies that has issues with the M chips, we should be able to since that in the next few weeks
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@YosephBarash
Yoseph Barash
3 months
@santata12 MAJIQ-L described in above tweet is available l. V3 is still under testing to make sure we have good back compatibility given that it's a major update and thousands of users... We'll be sure to announce when it's officially out.
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@YosephBarash
Yoseph Barash
3 months
RT @AI4Biology: G4mer: RNA language model identifies G-quadruplexes and disease variants across transcriptome. AI analyses population-scale…
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@YosephBarash
Yoseph Barash
4 months
@nomad421 @JamesPBLloyd if we asssume everything else is the same (which we know is not the case as we descrie in the paper…) will give the same mean and different variance of the estimator. Depending on the task (e.g. lowly expressed junction detection or DS estimation) this can be important.
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@YosephBarash
Yoseph Barash
4 months
@oligogirl Thank you @oligogirl for posting such nice read through of our paper! 😀👏I don’t think “smarter” is a correct assertion though - we just do other things, I’m sure I’ll have difficulties following some of your work, hence working together is key….🙂
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@YosephBarash
Yoseph Barash
4 months
RT @quaidmorris: 💥💥💥New preprint 💥💥💥on the EuPRI resource. Where we reconstruct the motifs for 34,736 RBPs and study their function and evo…
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@YosephBarash
Yoseph Barash
4 months
RT @andrei_thomas_t: Yet more ways alt #RNA #splicing drives #cancer chemoresistance. Take-home messages: a) some drugs targeting purine me…
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@YosephBarash
Yoseph Barash
4 months
RT @pkoo562: Are you a wet lab biologist ready to shape the future of AI in genomics? CSHL is hiring a PhD-level Research Associate to join…
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