Matthew Stephens Profile
Matthew Stephens

@mstephens999

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Professor in Statistics and Human Genetics at University of Chicago

Chicago, USA
Joined May 2012
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@mstephens999
Matthew Stephens
1 year
RT @SimingZhao06: Glad to see our paper, with @xinhe2 @mstephens999 @wescrouse Sheng and Kevin, is out today at @NatureGenet! https://t.co/…
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@mstephens999
Matthew Stephens
1 year
RT @xinhe2: The Department of Human Genetics at University of Chicago is searching for a faculty candidate in Computational genetic and gen…
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@mstephens999
Matthew Stephens
2 years
@wolfgangkhuber Related to this (but different), when you have multiple y variables which should you condition on and which should you treat as outcomes? Different choices corresponds to different models
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@mstephens999
Matthew Stephens
2 years
@aaronquinlan Brings back fond memories of Debbie Nickerson who drove so much development of polyphred before i ever got involved.
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@mstephens999
Matthew Stephens
2 years
RT @LukeAnderTroc: My PhD work "On the Genes, Genealogies, and Geographies of Quebec" is now published in SCIENCE!!🧑‍🔬 🌎We explore the eme…
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@mstephens999
Matthew Stephens
2 years
@molly_przew Thank you so much Molly. I feel so lucky to have had such great mentors, colleagues, and collaborators
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@mstephens999
Matthew Stephens
2 years
recent work from my lab on applying and interpreting topic models for single cell data:
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@mstephens999
Matthew Stephens
2 years
RT @zeyun_lu: PLZ RT: I’m happy to present @nmancuso_ Lab’s new software SuShiE (Sum of Single Shared Effects) that performs variational SN…
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@mstephens999
Matthew Stephens
2 years
@Sun_Y_Lee yes, should work, although i have to admit I have not used the package myself, so questions on that probably best directed to siming or wes...
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@mstephens999
Matthew Stephens
2 years
RT @getian107: Pleased to share our latest preprint. We extended the SuSiE model originally developed by the @mstephens999 Lab to a cross-…
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@mstephens999
Matthew Stephens
2 years
RT @nmancuso_: Glad to see this implementation out! We extended the SuSiE model to latent factors with SuSiE-PCA! Using JAX, SuSiE-PCA can…
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@mstephens999
Matthew Stephens
2 years
RT @lpachter: "Poisson-mash", or how to detect gene expression differences in multi-condition experiments (from the group of @mstephens999,…
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@mstephens999
Matthew Stephens
2 years
@jgschraiber @lpachter Yes Yusha has worked hard to make the computation tractable here. Gaussian models are definitely easier!
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@mstephens999
Matthew Stephens
2 years
RT @RLadiesMelb: Thanks so much @JovMaksimovic for sharing with us your love for #workflowr and huge thanks to the #workfowr developer @jdb
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@mstephens999
Matthew Stephens
2 years
RT @markrobinsonca: So, this came out ..
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@mstephens999
Matthew Stephens
2 years
RT @Y_Gilad: We have a new open-rank faculty search in the department of Medicine at the University of Chicago! We are looking for PhD scie…
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@mstephens999
Matthew Stephens
2 years
The University of Chicago, Department of Human Genetics, is searching for a new computational faculty. We are a small, friendly department doing top-quality science. Come join us! (Please RT)
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@mstephens999
Matthew Stephens
2 years
RT @jmuiuc: NIH peer review system is far from perfect, but it's the best I've seen. I just "retired" from the GCAT study section after 4 y…
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