RT @NikoMcCarty: This is an interesting (and short) paper about biases in forensic evidence. It argues that "an error in statistical reaso…

RT @andrewwhite01: We’ve just finished writing the missing 15,616 Wikipedia articles to get complete coverage of all 19,255 human genes. We…

@kieranrcampbell Seems useful! Have you noticed discrepancies between the the specificity or abundance of markers in RNA compared to antibody intensities?

RT @JImmatSci: BREAKING NEWS: The 2024 Noble Prize for Medicine has been awarded to Jack the Rat for his contribution to research on phallo…

@nr_claudio If it is Visium CellXGene is nice. EMBL's BioImageArchive has expressed interest in hosting spatial transcriptomics dataset. They can give you a link that you can use with Vitessce/Samui for GUI data exploration in the browser which is nice

RT @strnr: Conotoxins (cone snail venom) are one of the most deadly neurotoxins found in nature. Here's ConoDL/ConoGen: "an end-to-end co…

RT @katpyxa: While hanging out at a resource mostly for microscopy image analysis, sometimes I see people using #I…

RT @const_ae: There's a lot of excitement about foundation models and their ability to learn biology 🧬💻 But current tools for perturbation…

RT @petebankhead: Let me introduce: InstanSeg 🦠🔬💻👩‍🔬 This *would* have been a short thread about Thibaut Goldsborough’s PhD work… but he s…

@benoitbruneau @SethBlackshaw @WallaceUcsf Got a link? I am interested in classifying some cardiomyocytes :)

@GenomicsCow 10x ones are pretty good, down to how many times you are supposed to shake samples 🤪

RT @NeBanovich: Earlier this week we carried out a preliminary analysis of our first @10xGenomics Xenium prime (5,000 gene) run. We had des…

@shyam_lab @VairavanL @iaintan_mdphd @villanilab @astar_gis Hi @shyam_lab @VairavanL ,great work! When do you plan to relase a package? I would love to try it out with some of my samples that have been difficult to QC

RT @biorxiv_bioinfo: Pertpy: an end-to-end framework for perturbation analysis #biorxiv_bioinfo

RT @LukasHeumos: I'm so excited for the very first scverse conference from September 10-12 in Munich, Germany. We are very close to reachin…

RT @NikoMcCarty: This "frugal CRISPR kit" costs about $2. It includes a cell-free extract (no living cells), plasmids encoding colorful pr…

@ScienceScottT Cool, thanks a lot! I really like that more and more algorithms for improved clustering are coming out

@ScienceScottT @lpachter Could you elaborate on that a little bit? The new 10X flex kits can multiplex 16 fixed samples at once. How would you include replicates and include that in an analysis?