Josh Denny
@jdnashville
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Informatician/internist, prior Vanderbilt faculty, now with NIH All of Us Research Program. All views expressed are solely my own and not necessarily the NIH.
Joined August 2011
Tam Tran's PheTK paper as a faster, easier way to do PheWAS in biobanks is out: It supports phecodeX and phecode 1.2. See code that demonstrates use in a shared All of Us workspace in the researcher workbench:
Want to run #PheWAS w/ @AllofUsResearch? Check out this @medrxivpreprint by Tam Tran in my @genome_gov lab! The PheTK python package makes it easier & cheaper to run PheWAS b/c of built-in OMOP & Hall variant extraction support. Works w/ phecodes 1.2 & X!
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RT @AllofUsCEO: A sweet treat in more ways than one! Thrilled to welcome our 101st pediatric participant to All of Us! Dr. Sara Van Driest,…
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RT @pnatarajanmd: Prevention requires bold & forward-thinking investments. My OpEd on why letting funding lapse for @AllofUsResearch would…
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RT @AllofUsCEO: Hey @AllofUsResearch Workbench users—have you created a phenotype algorithm for a disease, a new analysis package, or pilot…
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RT @HeidiRehm: Today we announce the submission to #ClinVar of >32,000 variants evaluated for the return of hereditary disease risk in the…
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RT @AllofUsCEO: I am thrilled to share that a commentary on the @AllofUsResearch Program, co-authored by 27 leaders from across the @NIH &…
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RT @AlexBickMDPhD: Excited to share @AllofUsResearch program’s flagship genomics paper describing 245,388 clinical-grade genome sequences e…
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RT @AllofUsCEO: .@AllofUsResearch is seeking candidates for a Senior Data Science Strategist position to oversee data strategy development,…
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RT @AllofUsCEO: Work from @zeng_chenjie, staff scientist at my @genome_gov lab, shows @AllofUsResearch has a higher prevalence of disease t…
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RT @NIHforJobs: The All of Us Research Program in the Office of the Director (OD) is seeking motivated and qualified candidates for a Senio…
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If in #UX, please consider applying for @allofusresearch CXO, one of the largest, most diverse medical research cohorts in the world! #UXjobs
.@AllofUsResearch is preparing a recruitment for a Chief User Experience Officer responsible for leading all aspects of user-centered design. The position covers all aspects from potential participants to researchers using All of Us data. Here's how to apply by Jan. 26 👇 (1/2)
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RT @AllofUsResearch: As 2023 comes to a close, we are celebrating an important milestone! 750K have enrolled in the @AllofUsResearch Progra…
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RT @AllofUsCEO: DEADLINE APPROACHING: Abstract submissions for the @AllofUsResearch Program’s annual Researchers Convention are due next Fr…
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RT @DeptVetAffairs: VA’s Million Veteran Program just made history—and thanks to the more than 1,000,000 Veterans who’ve joined so far, MVP…
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RT @EricTopol: Lowering salt (one teaspoon) in the diet among middle-aged and older adults was as good an effect for reducing BP as a first…
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RT @JoshPetersonMD: Out in AJHG - large-scale return of sequencing results for >16,000 participants shows 44% received services in 1 year a…
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RT @AllofUsCEO: The @AllofUsResearch Program's exhibit booth is open! Our staff is there to talk about our unique dataset and how the data…
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RT @AllofUsCEO: The @NIH @AllofUsResearch Program has awarded $1.5M to institutions collaborating w/ Tribal communities to advance precisio…
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It was great work, @TACGeneMD, and a real pleasure to work with you. Next step - try it out in practice! 😀
Excited to share our recent publication in @GIMJournal. An exploration into the PheRS as a diagnostic aid. Big thanks to @jdnashville and @lisa_bastarache for their excellent mentorship on this project.
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RT @AllofUsCEO: You may be wondering when you'll receive your health-related DNA results. 🤔 We'll share more information soon. Good researc…
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