Chirag Jain
@chirgjain
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Assistant Professor @iiscbangalore. Previously @genome_gov, @GTcse and @IITDelhi
Bangalore, India
Joined September 2014
I enjoyed speaking at the @Indiaacm Winter School training workshop on algorithms for strings, hosted by @AMRITAedu in Coimbatore. Kudos to all the students and the organisers for making the sessions engaging!
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RT @sanchit_misra: Thrilled to share new version of Open Omics Acceleration Framework. Open Omics is envisioned as our performant and produ…
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New method speeds up genome alignment of complete and near-complete genome assemblies in minimap2. Can also be useful for faster read mapping Github: DOI: Led by @GhanshyamChand5, collab with @sanchit_misra @wasim_galaxy @intel
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Happy to see our method for T2T genome assembly published! It addresses an important limitation of string graph, that is, the contained reads. Led by @skamath5e "Telomere-to-telomere assembly by preserving contained reads"
SPECIAL ISSUE! This month @genomeresearch publishes a diverse collection of research and review articles in a special issue highlighting advances in long-read sequencing applications in biology and medicine.
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RT @lh3lh3: Pangene now published in Bioinformatics: In addition to showcasing applications (see the 17q21.31 inve…
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Our recent work "Haplotype-aware sequence alignment to pangenome graphs" is now online at @genomeresearch (RECOMB'24 issue). It introduces new algorithms and complexity results for the problem. Led by @GhanshyamChand5
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RT @cdsiisc: We send our appreciation to the speakers, poster presenters, participants, student and staff volunteers who contributed to the…
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RT @lh3lh3: Our review paper on "Genome assembly in the telomere-to-telomere era" published online in @NatureRevGenet. It amazes me how muc…
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RT @cdsiisc: Symposium on Big Data Algorithms for Biology (May 31-June 1 2024) is now open for registration and abstract submission [Deadli…
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RT @cdsiisc: The CDS department at IISC Bangalore invites applications for its summer internship programme, aimed at students pursuing the…
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RT @cdsiisc: Join us at the second annual Symposium on Big Data Algorithms for Biology (BDBio) on May 31-June 1, 2024 @iiscbangalore The 2-…
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RT @msikic: Happy to present an initial draft of a telomere-to-telomere diploid Indian genome. A joint effort of Jianjun Liu's and my lab s…
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RT @msikic: Are nanopore UL reads only long reads we need? We developed Herro AI error correction model that can co…
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RT @jmuiuc: The list of #RECOMB2024 Accepted Papers is now live: A huge congrats to all the authors! @RECOMBconf…
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Happy to see that the RAFT method was useful here @skamath5e
SM: @nanopore only T2T assembly enable by highly accurate ultra-long reads using off the shelves tools #NanoporeConf
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RT @RECOMBseq: RECOMB-Seq 2024 Call for Papers is out! Submit via EasyChair. Select “RECOMBSeq 2024” track within R…
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RT @RayanChikhi: Comparing graph construction methods for complete human pangenomes, by @frnandreac and @yoann_dufresne.
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