Kumar Saurabh Singh
@Kumar_S_Singh
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Assistant professor @MaastrichtU Exploring mechanisms of interaction & coevolution in biotic systems using integrative -omics
Venlo, Netherlands
Joined October 2009
Preprint alert 🌲🌲🌲 We are excited to share our work integrating metabolomics & transcriptomics to discover plant biosynthetic pathways. MEANtools uses resources like RetroRules & LOTUS to integrate reaction and structural knowledge. Additionally, implementing a GNN-based reaction likelihood score approach prioritizes anticipated reactions. Congratulations to all the coauthors @marnixmedema @jjjvanderhooft @s_vanwees @elena_delpup Hernando and Olga. 🌱 Recent works by @MarnixMedema group & @vdHooft_CompMet worth checking out! #multiomics #Metabolomics #Transcriptomics #Bioinformatics #PlantScience #OpenScience #SystemsBiology
MEANtools: multi-omics integration towards metabolite anticipation and biosynthetic pathway prediction #biorxiv_bioinfo
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RT @TrendsPlantSci: February Issue. Read FREE: Decoding resilience: ecology, regulation, and evolution of biosynthetic gene clusters (see c…
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RT @NaturePlants: New Resource: "Transposon proliferation drives genome architecture and regulatory evolution in wild and domesticated pepp…
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RT @sci_plant: The promising role of proteomes and metabolomes in defining the single-cell landscapes of plants
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RT @Hortres: High-quality genome of black wolfberry reveals anthocyanin genes, aiding breeding & conservation. #WolfberryGenome @OxfordJour…
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RT @MPlantPCom: Genomic, transcriptomic, and metabolomic analyses reveal convergent evolution of oxime biosynthesis in Darwin’s orchid #res…
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RT @MPlantPCom: Cropformer: An Interpretable Deep Learning Framework for Crop Genome Prediction #resource #PlantCommunications
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RT @biorxiv_bioinfo: MEANtools: multi-omics integration towards metabolite anticipation and biosynthetic pathway prediction
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RT @MPlantPCom: PDLLMs: A group of tailored DNA large language models for analyzing plant genomes #correspondence #MolecularPlant
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RT @marnixmedema: MIBiG 4.0 is out! Thanks @MitjaMZ and @kaiblin for spearheading this huge effort, and to the entire community for investi…
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RT @NatProdReports: Don't miss a review by Ranran Gao, Shilin Chen, Zhichao Xu & co at Northeast Forestry University in our latest issue on…
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RT @MPlantPCom: A telomere-to-telomere genome assembly of the cultivated peanut #correspondence #MolecularPlant htt…
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🚨 New Publication Alert 🚨 Effective #Visualization Strategies in Untargeted #Metabolomics - a review! This was a real #team effort and combined various disciplines! Very #ProudPI in #CompMetabolomics 😊😎 Please find the link and read more about it here:
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RT @Hortres: Hydrogen nanobubbles boost tomato antioxidants, new insights via multi-omics #AgTech @OxfordJournals Details:
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RT @NP_EiC: Carlos Hernán Barrera-Rojas and colleagues review the role of small RNAs in regulating the biosynthetic pathways responsible fo…
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RT @razoralign: NetworkCommons: bridging data, knowledge and methods to build and evaluate context-specific biological networks https://t.c…
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RT @mike_schatz: Next is Katharine Jenike (my awesome postdoc!) on Solanum pan-genomics and pan-genetics reveal paralogs as contingencies i…
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RT @thomaswicker314: Great news: our article on the analysis of 76 barley genomes has just been published
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