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Bryce Kille
@BKille
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PhD student and former software engineer in the Treangen lab at Rice University. MS in computer science from UIUC.
Houston, TX
Joined December 2019
@curious_coding @giulio_pibiri @traingene @SapovalNicolae Lastly, having @curious_coding as co-lead has been a blessing. In addition to being a TeX wizard, his attention to detail and ability to communicate concepts so clearly is impeccable. A great collaborator all-around 🤝
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@curious_coding We show that existing sampling schemes are actually a lot closer to being optimal than previously known. Thus, we encourage the usage of the best-known schemes so far. Making these more efficient is ongoing work.
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@curious_coding @krsahlin The t-minimizers would be a subset of (w, t)-minmers, right? Since it is picking the rightmost minmer for each window.
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@lh3lh3 @aphillippy @erikgarrison @traingene That's not really a strong argument though, since afaik there are no proven ties between 1-locality and Jaccard bias. It would be interesting to see a general relationship between locality and Jaccard estimation bias.
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RT @traingene: Happy to announce an open postdoctoral research scientist position in my group @RiceCompSci focused on exciting research que…
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RT @txu_teapot: The problem was really fun to work on! And as someone knowing little about genomes at the beginning, I was blessed to have…
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This was by far the largest and most collaborative project I’ve ever worked on and what a rewarding experience it was. Thanks to everyone who helped make it happen!
Very happy to share the latest paper from my group, SeqScreen, just published in @GenomeBiology. SeqScreen was led by my @RiceCompSci PhD students @AdvaitBalaji & @BKille, spanning 5 fruitful years of collaboration with Signature Science LLC @SigSci 1/n
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