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Petr Šulc
@petr_sulc
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Associate Professor at ASU and ERC PI at TUM. We use computer simulations and experiments to play with DNA and RNA in biology and nanotechnology
Tempe, AZ; Munich, DE;
Joined March 2014
Our new article with J Russo, D. Pinto and F. Sciortino out in @acsnano : We use our #SATAssembly method to design particles that assemble into 3D quasicrystal clusters, paving a way to their experimental realization with DNA nanostructures:
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RT @ML_Chem: Combination of Coevolutionary Information and Supervised Learning Enables Generation of Cyclic Peptide Inhibitors with Enhance…
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RT @acsnano: Using @ox_DNA simulations and experiments, @petr_sulc lab shows that adding functionalization (e.g. proteins) onto a DNA origa…
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RT @acsnano: .@petr_sulc, @progolab et al. demonstrate how the presence of single- & double-stranded overhangs drive entropy-induced confor…
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5/5: We also confirmed the effect when proteins are attached to DNA origami surface, using both experiments and simulations (with ANM-oxDNA model). The article is out at: Excellent work by my group: M. Sample, @progolab , T. Diep and H. Liu
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We are grateful for our new NSF POSE grant that allows us to expand and establish oxDNA open source ecosystem. Do you use (or want to) @ox_DNA , are there any features that you miss, any bottlenecks? We want to hear from you so that we can make the tools better, please DM me!
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Excited to join the @foresightinst workshop on nanotechnology!
We invite you to apply to not only one but two events to advance bottlenecks to nanotechnology development: 1. Molecular Systems Engineering Platform Launch One of the major bottlenecks holding back progress on nanotechnology is better software and simulation tools—until now. Join Eric Drexler, co-founder of Foresight Institute and nanotechnology pioneer, on October 4 at The Institute in SF to unveil a new engineering platform for molecular systems. 2. Functional Nanomachine Design Workshop Another bottleneck to progress in nanotechnology is the lack of a roadmap to guide the field. We'll build this map on October 5–6 at 50 Years Capital in SF! The workshop, chaired by Jeremy Barton, a specialist in nanoscale instrumental analysis, will bring together nanotechnology scientists, technologists, and funders who are driving the field of functional nanomachines forward, including Chris Schafmeister @TempleUniv Brenda Rubenstein @BrownUniversity @TMM2K MSEP @petr_sulc @ASU Ales Flidr @Convergent_FROs Andrew Turberfield @UniofOxford and many more.
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RT @foresightinst: We invite you to apply to not only one but two events to advance bottlenecks to nanotechnology development: 1. Molecula…
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A new tutorial by our student Sarah on using @ox_DNA ecosystem to simulate DNA origami: No coding needed, just web browser and your starting design file (cadnano or oxdna file format). Article also accompanied by video tutorial:
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Our collaboration with Rief and Simmel labs is now out in @NatureComms : A single-molecule study of strand invasion reactions: DNA invading DNA, RNA invading RNA, as well as DNA/RNA hybrids, accompanied by our @ox_DNA simulations
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