![Shaun Mahony Profile](https://pbs.twimg.com/profile_images/1021035521701818370/89RwgEW5_x96.jpg)
Shaun Mahony
@mahonylab
Followers
2K
Following
9K
Statuses
3K
Studying gene regulation and transcription factor binding specificity with machine learning. Assoc Prof @ Penn State. 🇮🇪
Penn State University
Joined June 2016
RT @sroyyors: Delighted to have worked on this perspective on the cis-regulatory code with @JuliaZeitlinger, @JasonErnstLab, @ferhatay, @AM…
0
24
0
@Atilgan__Yilmaz @stemcellreports @DevReg_KULeuven @scil_leuven Congrats on the paper - I enjoyed reading it! One minor note: the "FOX" genes your screen identifies in Fig S4E (RBFOX2, RBFOX3, and FOXRED1) - these are not part of the FOX TF family. They do not have Forkhead DNA-binding domains.
1
0
1
@TeifLab You may be interested in the part where we suggest that a subset of short-fragment nucleosomes (which could have lumped in with the "fragile" label in the past) may be due to MNase biases rather than nucleosome instability.
1
0
3
@Sauers_ Is the eigendecomposition run on k-mer spectra? You might just be seeing repetitive element structures
1
0
5
RT @lal_avantika: I’m happy to share that our paper “Designing realistic regulatory DNA with autoregressive language models” is now publish…
0
19
0
@rtraborn I'm so sorry to hear this. I always enjoyed chatting with Gabe, and hosted him here for a seminar 3 years ago.
1
0
1
RT @joselab_psu: #JobAlert Our @BMB_PSU @PSUScience has multiple tenure-track faculty positions in broad areas of #microbiology, including…
0
12
0
RT @rosshardison: Excited that we have a paper coming out in @genomeresearch exploring comparisons of epigenetic landscapes between species…
0
12
0
RT @BaiLab_PSU: Out now in Molecular Cell! Along with Tan and Mahoney labs, we combine cellular, in vitro, and computational methods to und…
0
13
0
RT @PennStateBio: Penn State Biology is looking for a Tenure Track Evolutionary Genomicist. We are a welcoming and supportive community - c…
0
87
0
RT @emo_davenport: My (awesome) department is hiring an evolutionary genomicist. Come be my colleague!
0
25
0
RT @LlinasLab: Very proud of this highly collaborative paper with the @mahonylab @RemoRohs and Gordân labs in which we explore how ApiAP2 t…
0
15
0
@vitaliikl Just use "schedule send" in gmail or "send later" in outlook - it's just one extra click and your email will be sent the following morning.
1
0
3