Jordão Bragantini
@jobragantini
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https://t.co/HVzB6mjulB or @ jookuma bsky social
San Francisco, CA
Joined August 2020
RT @TeunHuijben: Happy to be in sunny☀️San Diego for ASCB Cell Bio! Tomorrow I will present #Ultrack and #inTRACKtive (poster B513) at 11:1…
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RT @loicaroyer: 🚨Big news! Five years in the making, our Zebrahub paper is now published in #Cell 🎉. We’ve built a timecourse atlas of zebr…
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RT @TeunHuijben: 📣Excited to share inTRACKtive📣: a web-based tool to visualize, analyze, and share cell-tracking datasets - in real-time, i…
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🚀 Thrilled to announce #inTRACKtive: a web-based tool for exploring massive cell-tracking datasets, no software installation required! Just open your browser and dive into terabytes of developmental biology data. We used it to build the virtual of tracked embryonic development datasets 🐭🪰🪱🪲🐠, but you can also use it for your own data! 🔬 Preprint: Repository: This project was spear-headed by @TeunHuijben, together with engineers Andrew Sweet and @aganders3 from @cziscience
@czbbiohub #CZBiohubSF #devbio #tracking #web #visualization 🧵1/n
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RT @loicaroyer: 📡🧵 Excited to release two #bioRxiv preprints! The first preprint is: "Zebrahub-Multiome: Uncovering Gene Regulatory Networ…
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@loicaroyer Glad to have #ultrack pre-print out. Could not be happier with @loicaroyer's supervision and the help our collaborators.
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RT @loicaroyer: 📡🧵 Excited to release our preprint: Ultrack: Pushing the Limits of Cell Tracking Across Biological Scales
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Currently only supporting automatic segmentation and tracking. Interactive features will be added if there's enough interest.
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@jnuneziglesias @psobolewskiPhD @napari_imaging @SciPyConf @jnuneziglesias that would be super helpful, I remember you showing a demo of the labels being updated on-the-fly in napari as the watershed flooded
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RT @loicaroyer: 😍48 H100 80GB GPUs from @nvidia are being set up here at the @czbiohub . So excited to start using them!
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RT @HernanGGarcia: MS2 in zebrafish! Elizabeth Eck, @bmoretti_bio and Brandon Schlomann, in collaboration with @loicaroyer and @OatesLab la…
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@MascalchiP Yes, the segments are not split in the binary mask. The boundaries provide some cues of where the cells' limits are. It also works with segmentation labels as input, but they're tracked on the contour/mask space.
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RT @haesleinhuepf: My tutorial about "#GenerativeAI for #BioImageAnalysis" at #I2K2023 will start in about 1h. Download the slides #openacc…
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💻 Register now at to get ahead with cutting-edge cell tracking techniques! #ultrack #celltracking #Python #workshop See you there! 👋🔬
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