Jaebeom Kim
@jbeom_kim
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Developing software to analyze biological data at Seoul National University with @thesteinegger
Seoul, Republic of Korea
Joined July 2021
Easy taxonomic profiling with the Metabuli App! Explore your samples with publication-ready Sankey and Krona plots. We accelerated Metabuli further, classifying 2x22M reads vs. GTDB in just 43 min on a MacBook Pro M2. 🧵1/4 🚀 📄
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RT @thesteinegger: Unicore identifies single-copy protein structures across genomes using Foldseek, bypassing slow structure predictions b…
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RT @candlemove: 오늘 국회 앞 인파 2번이고, 3번이고 탄핵 가결될 때까지 끝까지 함께 싸워주십시오. 저희도 흔들리지 않고 탄핵만을 향해 가겠습니다. 부결 시 내일(8일) 오후 3시, 다시 국회 앞으로 모여주십시오. 시간은 변경될…
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RT @thesteinegger: New GPU-based MMseqs2: 20x faster searches on a single L40S (approx. as fast as a RTX 4090) vs. a 128-core CPU. This wor…
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RT @yazhiniav: Big thanks to @SoedingL @cshlmeetings @MSCActions for giving an opportunity to share my research work.
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It was a great honor to give a talk infront of researchers leading the microbiome field 😁 I really hope to join #cshlmbiome again !!
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RT @yan__shao: Excited to be speaking @cshlmeetings #cshlmbiome this week about our latest work on the neonatal gut microbiome—just out las…
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RT @yazhiniav: For anyone looking to classify metagenomic sequences, Metabuli from @thesteinegger is the tool for you! Big thanks to @cshlm…
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RT @AsafLevyHUJI: You can always trust @thesteinegger to select the most informative names to his useful databases! @milot_mirdita
#cshl_m…
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RT @yazhiniav: @milot_mirdita just delivered an excellent talk @cshlmeetings covering viral protein structure database, homology detection,…
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RT @QuantaMagazine: In 1956, 26-year-old Edgar Dijkstra invented a classic path-finding algorithm while out with his fiancée at a café in A…
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RT @yun_s_song: Antibodies are highly diverse, but most possible sequences are unstable or polyreactive. In this work led by @milind_jagota…
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RT @thesteinegger: "DRAGEN 4.2 license for academic use with limited number of genomes (Contact: XXX)". Curious what 'limited number' actua…
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RT @ValerioCapraro: Just published in @Nature! Research by @GoogleDeepMind including Nobel Laureate @demishassabis introduces a novel tec…
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RT @thesteinegger: Don’t miss’s my lab members poster&talks at #APBJC2024 1) Structural motif discovery at AFDB scale + talk @HKgenomics 2)…
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I'm excited to share that a pipeline I prototyped during my undergrad is now available as a preprint! COmapper maps meiotic crossover sites using ONT reads extracted from pollen! Simply put, it detects transitions from maternal to paternal SNPs in pollen genomes of F1 hybrids.
Excited to share our preprint titled: "COmapper: High-resolution mapping of meiotic crossovers by long-read sequencing in Arabidopsis" on BioRxiv! COmapper enables high-resolution CO maps from F1 hybrid pollen and F2 seedlings using nanopore sequencing.
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RT @Kyuha_C: Excited to share our preprint titled: "COmapper: High-resolution mapping of meiotic crossovers by long-read sequencing in Arab…
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RT @sokrypton: @SluskyLab Also all the folks involved in high throughput DNA sequencing, sequence databases, sequence alignment and sequenc…
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