ipstone
@isaacpei
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1/ Introducing SCimilarity, a new foundation model to explore scRNAseq data across tissues and diseases! It learns a common measure of cell similarity by training a deep metric learning model on millions of cells from various human tissues and conditions.
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Featured today by @MSKLibrary: Large-scale copy number alterations are enriched for synthetic viability in BRCA1/BRCA2 tumors
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@Pheno2geno @xrtGenomics @Yingjie_life Thanks Xiaoxiao, there are so much to be known, fascinating time for cancer genomics!
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@Yingjie_life @Samuel_Bakhoum @danielkbronder @jeremy_setton Fantastic summary YJ! I am really happy working on this project with the sooth collaboration with @Yingjie_life and wonderful guidance from @xrtGenomics
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RT @xrtGenomics: New paper out! Led by @Yingjie_life and @isaacpei. We tried to figure out how BRCA-related cancers compensate from a prol…
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RT @Yingjie_life: 1/9 Excited to share our latest publication! Check out our paper: “Large-scale copy number alterations are enriched for s…
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RT @StevenSalzberg1: Wow, @nature has retracted the 2020 Poore et al. cancer microbiome paper that we showed ( was…
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@tangming2005 There is a paid plugin allowing more direct ssh access, but due to the much better remote mode in vscode, I have largely switched to vscode
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RT @xrtGenomics: 1/N Finally out!! -- 30Gy for HPV+OPC in @JCO_ASCO – work by the @MSKCancerCenter Head and Neck team, led by @imrtlee, Eri…
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"a new generation of AlphaFold that can handle arbitrary interactions of proteins, nucleic acids, arbitrary small molecule ligands, and modified or non-canonical residues." -
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a really cool command line data viewer, it’s really cool and useful for us dealing with command line/data analysis all day:
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RT @LabLegube: Our paper is out, Bravo and thanks to all the contributors!!👏👏 Take home: after DSB induction, gH2AX domains self-segregate…
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