Cahan Lab | at JHMI
@cahanLab
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Computational & Experimental Stem Cell Biology. A member of the Department of Biomedical Engineering at Johns Hopkins University.
Baltimore, MD
Joined August 2016
@ekernf01 diagnoses false discoveries in GRNs in our latest paper. Grateful to Dr. Andrianantoandro @CellSystemsCP and reviewers like @anthonygitter for their invaluable peer review. This is how peer review should be done! 📄🔗
After precisely 4 years of grad school, I'm excited to share that the FIRST PEER REVIEWED PAPER FROM MY PHD HAS LANDED! Indulge me in some back-story. 🧵
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PACNet quickly measures transcriptional fidelity of engineered cells from bulk data. Robust to exp method, it also compares yours to previously published data. Led by Emily Lo, with Dan Peng @Jvquez12 @MoEbrahimkhani @ChulanKwonLab. See @stemcellreports
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@ekernf01 @ekernf01's paper in collab with @alexisjbattle uses model-X knockoff to address a huge problem with GRNs: unacceptably high FPR. Finds that causal sufficiency (assumed by most GRN methods) is invalid, raising doubts on the reliability of GRN results and methods that rely on them
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RT @kalhorlab: We are looking for new postdocs to join our team. Positions are fully funded and you can pursue your interest in technology…
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RT @CellPressNews: Submit your research to Stem Cell Reports—the premier society journal for stem cell research and an open access forum co…
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RT @stemcellreports: We are pleased to announce the call for papers for a new special issue on the clinical translation of PSCs, guest edit…
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M Zamani @NganHuang & R Cheng @cahanlab @HopkinsMedicine ID-ed regulators of endothelial to mesenchymal transition. Exploring #Tgfb & substrate stiffness on #EndMT they found a Mesenchymal-to-endothelial reversion and linked populations to #atherosclerosis
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RT @vangalenlab: Single-cell papers that make the count matrices and cell type classifications easily available are 100% more likely to be…
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RT @LSI_Exeter: Four permanent posts in interdisciplinary research at the Living Systems Institute - uniting maths, physics, and biology. A…
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