Tartu_Microbiome
@TartuMicrobiome
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Professor Elin Org's Microbiome research team @genomicstartu focusing on gut microbes, medication usage and beyond
Tartu, Estonia
Joined September 2023
Our new preprint presents a collection of human gut #archaea MAGs. Check it out!
🦠 Excited to share our new collection of human gut #archaea species! 🎉 🇪🇪From @ESTbiobank, we present a dataset of 144 strains across 21 species, including 9 entirely new species! A thread 🧵 #MAG #EstMB #TartuMicrobiome #microbiome #humangut
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Very happy to see this collaboration project between Tartu and Umeå on how history of repeated #antibiotic use affects #gutmicrobiota and leads to mucus layer defects now being published in Gut Microbes! @unitartu @umeauniversity
Antibiotics (ABX) revolutionised #medicine, increased our life expectancy and are essential in fighting bacterial #infections when taken responsibly. (2/20)
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Our new preprint examines the interaction between the gut microbiome, semaglutide, and empagliflozin for type 2 diabetes treatment. Check it out!
Very happy to share the results of my first preprint from @TartuMicrobiome. We found how the gut microbiome can impact semaglutide and empagliflozin treatment for type 2 diabetes. 🧵 1/5 #semaglutide #ozempic #empagliflozin #microbiome #MicrobiomeResearch
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We are excited to share this new pre-print on the first Estonian gut MAG collection. 🦠 The paper showcases the diversity of bacteria in the Estonian population and their links to prevalent diseases
‼️🦠 Excited to share my very first preprint on new Estonian #Microbiome MAGs from @ESTbiobank! Discoveries include a new bacteria from #humangut linked to prevalent diseases. A thread 🧵 #mag#EstMB#TartuMicrobiome#MicrobiomeResearch #PhDlife
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@org_elin 🧵 5/5 June 25: @annabel_kls presents how semaglutide and gut microbiome impact each other (08:30 to 09:00, Room Q, Monitor 1) #tartumicrobiome #IHMC2024 #semaglutide #ozempic #microbiome
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@org_elin 🧵 4/5 June 25: @KreeteLull presents poster on the effect of hormonal contraceptives on the gut microbiome (8.30 to 9:00, Room Q monitor 3) #tartumicrobiome #IHMC2024 #EstMB #contraceptives #metagenomics
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@org_elin 🧵 3/5 June 24: @kkrigul presents what are the long term physiological effects of antibiotics use (16:30 to 17:00, Room Q, monitor 2) #tartumicrobiome #IHMC2024 #EstMB #mucus #antibiotics #metagenomics
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@org_elin 🧵 2/5 June 24: @KPantiukh will talk about the new MAGs Collection from the Estonian population cohort (16:30 to 17:00, Room Q at monitor 2) #tartumicrobiome #IHMC2024 #EstMB #MAG #metagenomics
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A proud day for the team as professor Elin Org was giving her inaugural lecture in the Assembly hall of the University of Tartu
Congratulations to our most recent professor @org_elin and thank you for establishing the #microbiome cohort at @ESTbiobank
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Elin Org's and Leo Lahti's teams meet up in Kääriku, Estonia to discuss which directions we can take together @antagomir @org_elin
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Another fruitful and very enjoyable collaboration is out as a preprint! Job well done by @oliveraasmets from our side.
Excited to share our latest preprint on a novel computational tool to predict fecal microbial load solely from relative species profiles! Our study revealed that fecal microbial load is a substantial confounder in microbiome-disease association studies.
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A fruitful collaboration indeed between @mims_umea and @genomicstartu. We are excited to share this new pre-print about the effects of repeated #antibiotics use on the intestinal #mucus layer using the Estonian Microbiome Project's unique deeply phenotyped dataset and samples.
When my "gut feeling" becomes a final paper for my PhD! Using carefully selected FMT donors from #EstMB, we show that repeated antibiotics use in the past => weaker mucus layer + increase in mucus degraders (Akkermansia muciniphila, Bacteroides fragilis + others)🧵 #antibiotics
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Woot! A pre-print? Yup! Work lead by @NeleTaba and @oliveraasmets assessing the #causal effect of #microbiome on health. You can still catch them today at #EESMicrobiome @EMBLEvents to have a chat about it!
A novel framework for assessing causal effect of microbiome on health: long-term antibiotic usage as pseudo-randomizer #medRxiv
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Six of our team members are excited to talk to you about very cool manuscripts at #EESMicrobiome. From MAGs and Westernized populations to microbial metabolites, #antibiotics and long-term 💊 effects🔬Serious science and bubbly personalities guaranteed! ☀️ Look for the logo 😎
Excited to share my PhD's findings at the @embl @EMBO Human Microbiome Conference! 🦠 Find me at Poster #184 to dive into the world of metagenome assembly. Let’s exploring its potentials and challenges. 🧬 #EESMicrobiome #PhDResearch @TartuMicrobiome
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Not that we didn't do science before, but we are finally here! Come meet us at #EESMicrobiome @org_elin @oliveraasmets @KaterinaPantiuk @KKrigul @NeleTaba @jaagura
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