Josh Cuperus
@RNAnerd
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Genomics in Plants and Yeast, Assistant Professor
Joined January 2012
RT @omalley_ronan: New preprint! An atlas of conserved TF binding sites across flowering plants generated with multiplexed DAP-seq. When i…
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RT @dschweppe1: Our lab is looking for a postdoc @uwgenome/@UW/@UWISCRM! We tackle a wide range of biological Qs from cell-specific respon…
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RT @TobiasJores: Out now on biorxiv: We studied the activity of enhancer-blocking insulators in plants and found that they also act as sile…
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RT @Marand_Lab: Excited to share our latest work investigating the consequences of extant genetic variation in cis-regulatory elements at s…
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RT @oligopain: I haven't posted much on ye olde bird app recently, but doing my best to make up for it with some BIG NEWS... Introducing D…
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RT @stergachislab: Are CpG methylation and chromatin accessibility polar opposites? #Fiberseq proves they are not in #maize – transposon en…
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RT @lampoona: Climate change be damned! Out in @NatureComms, we interrogated over 54k plant terminator sequences to synthetically design ro…
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Thrilled to present our collaboration w/ @stergachislab members “The regulatory potential of transposable elements in maize”. Single-molecule Fiber-seq - accurate and sensitive accessibility in maize. New open chromatin regions in LTRs and much more!
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RT @NAASC_NA_ICAR: I'm thrilled to announce the complete program for #ICAR2024SanDiego! 👉🏽Please check out the amazing line of up over 300…
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RT @stergachislab: I understand imitation is the sincerest form of flattery, but as junior faculty it is frustrating when @nanopore copies…
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RT @KenBirnbaum: Please join us for a tribute symposium on May 17 to Philip Benfey, a luminary in plant biology. Details and Zoom link here…
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RT @ThePlantCell: IN BRIEF: Dissecting and redesigning enhancers of photosynthesis genes (Peng Liu) @RNAnerd @ASPB…
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@HarmitMalik @ChenxinLi2 Transient assays tell us that the free floating dsDNA is transcribed and follow most rules of chromosomal genes
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@ChenxinLi2 We have reason to believe they are both chromatinized and even might have histone modifications
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RT @NAASC_NA_ICAR: Josh Cuperus- Univ of Washington-Seattle, @RNAnerd is organizing the "Chromatin at Single-cell & Single-molecule Resolu…
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RT @ThePlantCell: Plant enhancers exhibit both cooperative and additive interactions among their functional elements (Tobias Jores, Jackson…
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RT @sudpinglay: Structural variants (SV) impact more nucleotides per human genome than other forms of genetic variation. To better unders…
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