RT @msikic: We are organising at#ICLR2025. Topics: RNA, DNA and cell LLMs, structure, modifications, correction, v…

RT @lovrovrcek: Submit your papers to our workshop AI for Nucleic Acids workshop at ICLR 2025!

RT @ai4na_workshop: 🚨 1 month to go! 🚨 The submission deadline for the AI4NA workshop at @iclr_conf is fast approaching! 🧬 ✨ Submissions on…

RT @ai4na_workshop: 🚀Thrilled to be part of ICLR 2025! Join our workshop AI for Nucleic Acids (AI4NA) to explore cutting-edge research and…

@JosipaLipovac Congratulations on your publication! 🎉 Looking forward to seeing the impact of your research!

RT @msikic: RNA structure prediction is still an open problem. Look at our benchmark results (including Alphafold 3!)

RT @biorxiv_bioinfo: A Comparative Review of Deep Learning Methods for RNA Tertiary Structure Prediction #biorxiv_…

RT @msikic: We are seeking talented PhD candidates in CS, physics or math to join us. The topics include the development of AI for cancer a…

RT @LeoTZ03: CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction -…

RT @msikic: Our RNA LLM RiNALMo has received the prize for the most ambitious submission at the Machine Learning for Life and Material Scie…

RT @msikic: Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing has been published in Nat…

RT @msikic: Considering building a human pangenome? Dive into our latest preprint for insights on the sequencing technologies and the minim…

RT @lovrovrcek: Our new paper is out! We made a lot of progress on our GNN-based de novo genome assembly paradigm and here we present all o…

@YannPonty @msikic @CamilleMrcht @ywan_wan We tried replacing this algorithm with hungarian algorithm but did not see any significant improvements. Positive class threshold was tuned on the validation set. (3/N)

@YannPonty @msikic @CamilleMrcht @ywan_wan No need to apologize, in my opinion you are asking the good questions, we greatly appreciate your insights! :)

@YannPonty @msikic @CamilleMrcht @ywan_wan If my database doesn't contain any RNAs that are evolutionary related to my query RNA, I won't be able to construct a "good" informative MSA and therefore I won't be able to output an accurate prediction. (4 / 4)