Macha Nikolski
@MachaNikolski
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Computational biology and bioinformatics, artificial intelligence, tango and literature are some of my interests, CNRS - Bordeaux. Opinions are my own
Bordeaux
Joined October 2011
RT @ItaiYanai: It’s crazy how talking with a science buddy is simultaneously what’s most likely to move the project forward and the thing t…
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🎉 A fantastic way to wrap up the year! 🚀 Excited to share our team's latest work led by @domitille_ch : SeuratIntegrate R package enhances Seurat v5 with 8 integration methods & batch correction evaluation tools. Check it out! #scRNAseq #Bioinformatics #SingleCell
🆕New publication from our team! The SeuratIntegrate R package expands Seurat v5's integration capabilities, supporting 8 methods (R & Python-based) with tools for evaluating batch correction performance. #scRNAseq #Bioinformatics
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Excited to present our work on TrialMatchAI, a powerful #AI based tool for matching #cancer patients to #clinical #trials, developed by @majdabd33 from our #CNRS team, at the AI Meets Cancer Research Symposium 2024! 🧬
🔴📆 Save the date! 👉 Nov 11-12 🖥 'AI Meets Cancer Research Symposium 2024' 🔬 📍At #CNIOStopCancer 👥Organizers: #CNIOStopCancer @BSC_CNS @columbia #PMG #ColumbiaUniversity @columbiacancer @RabadanLab @Alfons_Valencia 🔗Registrations are open:
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RT @NatureMedicine: A #foundationmodel leverages large-scale medical knowledge to repurpose drugs for diseases that currently lack approved…
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@SoyBiotec @rugorator @univbordeaux Happy to have you with us! Looking forward to the exciting #science of #lncRNA #cancer #bioinformatics
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@SoyBiotec @univbordeaux We are lucky to have you with us! Looking forward to #lncRNA #cancer data #research
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New publication from our team: DECOMICS – a Shiny app for unsupervised cell type #deconvolution & interpretation of bulk #omic data. Unlock insights from expression or methylation data with state-of-the-art deconvolution and enrichment analysis! #Bioinformatics @KarkarSlim
🖥️ "DECOMICS, a shiny application for unsupervised cell type deconvolution and biological interpretation of bulk omic data" shares a tool to analyze #transcriptomic & methylome data w/ integrated visualization & interpretation capabilities #Bioinformatics
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RT @rita_strack: I've heard from many that it's not about starting databases and repositories, but about long term funding and maintenance.…
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Excited to share that a new #EOSC4Cancer deliverable focusing on enhancing interoperability between clinical trial databases and Clinical Decision Support Systems for #oncology. Special kudos to @majdabd33 for his work on the #NLP powered matching of patients to #clinicaltrials
📢 New EOSC4Cancer deliverable! D3.1 details the interoperability between clinical trial databases and Clinical Decision Support Systems. Main authors are @MachaNikolski of @CNRS and @DavidTamborero of @karolinskainst working within WP3. Check it out:
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RT @ItaiYanai: 🔥Just published! What are the principles of plasticity in cancer cells? Studying 7 cancer types we propose that developmenta…
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RT @agroppi: Join us for our 3rd "Biologie Spatiale" webinar on April 22nd at 11:30am, hosted by the @CanceropoleGSO . Johanna Galvis-Rodri…
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Excited to announce that our DIMet tool @hecht_h @yguitton44 @Thomas_Daubon to analyse targeted isotope-labeled metabolomics data is now live on Workflow4Metabolomics Galaxy! Explore it under the "Isotopic Studies": #Metabolomics #Bioinformatics #DIMet
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[FR] Félicitations à nos jeunes membres d'équipe pour leur participation remarquable à la Battle @DepartementSBM sur le thème "IA : la recherche sans chercheur, la médecine sans clinicien". Bravo ! #IA #bioinformatique #éthique #recherche #clinique
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Exciting results from our lab by @domitille_ch presenting a novel atlas of hepatic innate immune cell atlas in #HCC and identifying THBS1+ Mreg cells as key in disease progression and poor prognosis. #Cancer #bioinformatics #SingleCell #research
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Advocating for #federated #cancer #data management, our latest publication showcases the @ELIXIREurope roadmap for cancer data infrastructure in Europe for research and precision medicine, uniting data sharing, privacy, and innovation
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RT @EOSC4Cancer: 🎗 February 4th marks #WorldCancerDay, dedicated to raising awareness of the devastating illness and encouraging its preven…
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RT @gxr: Preregistration is open for 2nd International Genome Graph Symposium in Monte Verita, Ascona (6/30-7/4). Keynote speakers include…
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