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soft/living matter fanclub

@softlivmat_fc

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we highlight the latest articles that bring together physics and biology.

Joined August 2020
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@softlivmat_fc
soft/living matter fanclub
9 months
soft/living matter fanclub is now also available on bluesky!
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@softlivmat_fc
soft/living matter fanclub
8 months
L. Balasubramaniam, et al., Dynamic forces shape the survival fate of eliminated cells. Nat. Phys. 1–10 (2025).
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@softlivmat_fc
soft/living matter fanclub
8 months
F. L. Lampart, et al., Morphometry and mechanical instability at the onset of epithelial bladder cancer. Nat. Phys. 1–10 (2025).
nature.com
Nature Physics - Carcinoma subtypes are normally linked to specific genetic alterations, but tissue mechanical changes also play a role. Now, aberrant morphologies resembling bladder carcinoma are...
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@softlivmat_fc
soft/living matter fanclub
8 months
G. Šneiderienė, et al., Lipid-induced condensate formation from the Alzheimer’s Aβ peptide triggers amyloid aggregation. Proc. Natl. Acad. Sci. U. S. A. 122, e2401307122 (2025).
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@softlivmat_fc
soft/living matter fanclub
8 months
T. Tlusty, A. Libchaber, Life sets off a cascade of machines. Proc. Natl. Acad. Sci. U. S. A. 122, e2418000122 (2025).
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pnas.org
Life is invasive, occupying all physically accessible scales, stretching between almost nothing (protons, electrons, and photons) and almost everyt...
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@softlivmat_fc
soft/living matter fanclub
8 months
A. A. Fragkopoulos, F. Böhme, N. Drewes, O. Bäumchen, Metabolic activity controls the emergence of coherent flows in microbial suspensions. Proc. Natl. Acad. Sci. U. S. A. 122, e2413340122 (2025).
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pnas.org
Photosynthetic microbes have evolved and successfully adapted to the ever-changing environmental conditions in complex microhabitats throughout alm...
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@softlivmat_fc
soft/living matter fanclub
8 months
J. Wang, J. E. Butler, A. J. C. Ladd, Microfluidic purification of genomic DNA. Proc. Natl. Acad. Sci. U. S. A. 122, e2417757122 (2025).
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@softlivmat_fc
soft/living matter fanclub
8 months
D. Valverde-Mendez, et al., Macromolecular interactions and geometrical confinement determine the 3D diffusion of ribosome-sized particles in live Escherichia coli cells. Proc. Natl. Acad. Sci. U. S. A. 122, e2406340121 (2025).
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pnas.org
The crowded bacterial cytoplasm is composed of biomolecules that span several orders of magnitude in size and electrical charge. This complexity ha...
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@softlivmat_fc
soft/living matter fanclub
8 months
H. J. Oh, et al., Size-controlled assembly of phase separated protein condensates with interfacial protein cages. Nat. Commun. 16, 1–14 (2025).
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nature.com
Nature Communications - This study introduces a one-pot method to create and control protein condensates using surface-stabilizing protein cages, allowing size tuning from the micro- to nanoscale...
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@softlivmat_fc
soft/living matter fanclub
8 months
K. Tomohara, Y. Minagawa, H. Noji, Artificial cells with all-aqueous droplet-in-droplet structures for spatially separated transcription and translation. Nat. Commun. 16, 1–11 (2025).
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@softlivmat_fc
soft/living matter fanclub
8 months
E. Han, et al., Local polar order controls mechanical stress and triggers layer formation in Myxococcus xanthus colonies. Nat. Commun. 16, 952 (2025).
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nature.com
Nature Communications - The decision to form a fruiting body have been studied extensively, however, the mechanical events that trigger the creation of multiple cell layers is poorly understood....
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@softlivmat_fc
soft/living matter fanclub
8 months
M. Burman, A. Noy, Atomic description of the reciprocal action between supercoils and melting bubbles on linear DNA. Phys. Rev. Lett. 134 (2025).
journals.aps.org
Although the mechanical response of DNA to physiological torsion and tension is well characterized, the detailed structures are not yet known. By using molecular dynamics simulations on linear DNA...
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@softlivmat_fc
soft/living matter fanclub
8 months
J. Liang, et al., Glass transition in monolayers of rough colloidal ellipsoids. Phys. Rev. Lett. 134 (2025).
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journals.aps.org
Roughing up the surfaces of particles in a colloidal system can smooth its transition into a glassy state.
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@softlivmat_fc
soft/living matter fanclub
8 months
L. A. Hoffmann, L. Giomi, Homochirality in the Vicsek model: Fluctuations and potential implications for cellular flocks. Phys. Rev. E. 111 (2025).
journals.aps.org
Chirality is a feature of many biological systems, and much research has been focused on understanding the origin and implications of this property. Famously, sugars and amino acids found in nature...
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@softlivmat_fc
soft/living matter fanclub
8 months
P. A. Haas, S. S. M. H. Höhn, Cut it out: Out-of-plane stresses in cell sheet folding of Volvox embryos. Phys. Rev. E. 111 (2025).
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journals.aps.org
This work analyzes the mechanical dynamics driving inversion of the $V\phantom{\rule{0}{0ex}}o\phantom{\rule{0}{0ex}}l\phantom{\rule{0}{0ex}}v\phantom{\rule{0}{0ex}}o\phantom{\rule{0}{0ex}}x$ embryo,...
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@softlivmat_fc
soft/living matter fanclub
8 months
S. R. Noureen, R. L. Mort, C. A. Yates, Modeling adhesion in stochastic and mean-field models of cell migration. Phys. Rev. E. 111 (2025).
journals.aps.org
Adhesion between cells plays an important role in many biological processes such as tissue morphogenesis and homeostasis, wound healing, and cancer cell metastasis. From a mathematical perspective,...
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@softlivmat_fc
soft/living matter fanclub
8 months
H. Noguchi, Spatiotemporal pattern formation of membranes induced by surface molecular binding/unbinding. Soft Matter (2025).
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pubs.rsc.org
Nonequilibrium membrane pattern formation is studied using meshless membrane simulation. We consider that molecules bind to either surface of a bilayer membrane and move to the opposite leaflet by...
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@softlivmat_fc
soft/living matter fanclub
8 months
M. Safdari, S. Li, S. Panahandeh, P. van der Schoot, R. Zandi, Impact of the RNA binding domain localization of the protein shell on virus particle stability. arXiv [physics.bio-ph] (2025).
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@softlivmat_fc
soft/living matter fanclub
8 months
C. Hanauer, et al., A model for self-organized growth, branching, and allometric scaling of the planarian gut. arXiv [physics.bio-ph] (2025).
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arxiv.org
The growth and scaling of organs is a fundamental aspect of animal development. However, how organs grow to the right size and shape required by physiological demands, remains largely unknown....
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